![]() ![]() New ms_peptidesummary parameters: target FDR and FDR type. The GCC 4.8.5 static and shared libraries now shipped with Parser can be used with both GCC 4.8.5 and later, and Intel® Compiler 2016 and later. ![]() Logging and error handling documentation is mostly missingĪllow zero child elements in mxm:accessions, mxm:filters, mxm:scope, mxm:settings Make ms_searchparams thread safe and more efficient Only return false from getThresholdForFDRAboveHomology() if closest FDR is not within a factor of 2 of target FDR ![]() New parameter for ms-createpip.exe multithreading Ms_proteinsummary needs to check inference flags Ms_aahelper never returns internal ions over 700 Da Parser 2.8 ships with libraries compiled for VS2012, VS2013, VS2015 and VS2017. New options PercolatorTargetRankScoreThreshold and PercolatorTargetRankRelativeThresholdĪdd static and shared libraries for VS2017. UpdateForInstaller: replace PercolatorFeatures with new feature set New setting for number of input file parsing threads Parser 2.7.0 C# is built with VS2015, not VS2012 GetThresholdForFDRAboveIdentity() doesn't always work when Percolator is enabled Section title "Using STL classes" should mention vectord, vectori, VectorString Parser 2.8 and later are now 64-bit only on all platforms. ![]() See Error tolerant searches.Įnd of 32-bit Parser on Windows. Version 2.8.0 - released with Mascot Server 2.8 IDĬalculate an expect value for error tolerant matches. Increase limit of taxonomy choice include/exclude line length - new limit is 32kB Xml configuration files should not be written in place Start and end of quantitation match range can be reversed causing out of memoryĮrror message 539 lacks information - relevant taxonomy node files now added to error messageĭodgy protein inference when two interlinked proteins have the same very short beta peptide Sorting unassigned list fails if filtering is active, caused by findPeptides() always returning results in query order Version 2.8.1 - released with Mascot Server 2.8.1 IDĥ02.2 - Bad Gateway on opening search results, caused by segfault while reading empty protein description ![]()
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